dynamo.pl.tsne¶
-
dynamo.pl.
tsne
(adata, *args, **kwargs)[source]¶ Scatter plot with tsne basis.
- Parameters
adata (
AnnData
) – an Annodata object.- Returns
- Return type
Nothing but plots the tsne embedding of the adata object.
Examples
>>> import dynamo as dyn >>> adata = dyn.sample_data.hgForebrainGlutamatergic() >>> adata = dyn.pp.recipe_monocle(adata) >>> dyn.tl.dynamics(adata) >>> dyn.pl.tsne( ... adata, ... color='ntr' ... )