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Introduction

  • Time-resolved scRNA-seq
  • Primer on differential geometry
  • Optimal cell fate transitions via most probable path
  • in silico perturbation

Contents

  • 10 minutes to dynamo
  • API
  • Class
  • Release notes
  • Reference

Preprocessing

  • Preprocessing Tutorial

Conventional scRNA-seq

  • Zebrafish pigmentation

Labeling scRNA-seq

  • scNT-seq human hematopoiesis dynamics
  • scNT-seq
  • scEU-seq cell cycle
  • scEU-seq organoid

Differential geometry

  • scNT-seq human hematopoiesis
  • Zebrafish pigementation

Vector field predictions

  • Most probable path predictions
  • in silico perturbation

Gallery

  • Tutorial gallery
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  • Search

© Copyright 2020, Xiaojie Qiu, Yan Zhang, Ke Ni. Revision 2983dee2.

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