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Introduction

  • Time-resolved scRNA-seq
  • Primer on differential geometry
  • Optimal cell fate transitions via most probable path
  • in silico perturbation

Contents

  • 10 minutes to dynamo
  • API
  • Class
  • Release notes
  • Reference

Conventional scRNA-seq

  • Zebrafish pigmentation

Labeling scRNA-seq

  • scNT-seq human hematopoiesis dynamics
  • scNT-seq neuronal activity
  • scEU-seq cell cycle
  • scEU-seq organoid

Differential geometry

  • scNT-seq human hematopoiesis
  • Zebrafish pigementation

Vector field predictions

  • Most probable path predictions
  • in silico perturbation

Gallery

  • Tutorial gallery
    • Pancreatic endocrinogenesis differential geometry
dynamo
  • Tutorial gallery
  • Edit on GitHub

Tutorial gallery

Welcome to the dynamo tutorial gallery. If you have any new analysis results worth sharing by applying dynamo to your dataset, welcome to let us know in github or via email and we can put them in this gallery.

Pancreatic endocrinogenesis analysis

Pancreatic endocrinogenesis differential geometry

Gallery generated by Sphinx-Gallery

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© Copyright 2020, Xiaojie Qiu, Yan Zhang, Ke Ni. Revision ba43701c.

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