dynamo.pd.get_init_path

dynamo.pd.get_init_path(G, start, end, coords, interpolation_num=20)[source]

Get the initial path for the least action path calculation.

Parameters:

  • G (Graph) – A networkx graph representing the cell state space.

  • start (ndarray) – The starting point of the path.

  • end (ndarray) – The end point of the path.

  • coords (ndarray) – The coordinates of the cell states.

  • interpolation_num (int) – The number of points to use in the initial path.

Return type:

ndarray

Returns:

The initial path for the least action path calculation.